BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035E11LP1|AL430074
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1561 1818 0.0
>3x_Contig1561
Length = 10959
Score = 1818 bits (917), Expect = 0.0
Identities = 917/917 (100%)
Strand = Plus / Minus
Query: 1 gatcaaaattgacaatgttcaagatatccctaagttagtcgatgaaaatgaacaaacgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2512 gatcaaaattgacaatgttcaagatatccctaagttagtcgatgaaaatgaacaaacgag 2453
Query: 61 cttcaaattccctggatctccaacaaccgagtctaagaatctaggtcaccgtagaactca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2452 cttcaaattccctggatctccaacaaccgagtctaagaatctaggtcaccgtagaactca 2393
Query: 121 gtcaaatatgtcccctaatagatcattccagtttccacctgctaagttgaaccaaaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2392 gtcaaatatgtcccctaatagatcattccagtttccacctgctaagttgaaccaaaagga 2333
Query: 181 aaacaatgatgatttcatacccgttggaaccccgcatcgtcgcactaattcgaaaaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2332 aaacaatgatgatttcatacccgttggaaccccgcatcgtcgcactaattcgaaaaatga 2273
Query: 241 aggtatcgacggtaattggaggttgcaacaacagcaacagcaggtatcgccatttcatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2272 aggtatcgacggtaattggaggttgcaacaacagcaacagcaggtatcgccatttcatca 2213
Query: 301 ctctagaacgcattcaagagaatattcaggccacccaggtttggaaccaccacctgtctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2212 ctctagaacgcattcaagagaatattcaggccacccaggtttggaaccaccacctgtctt 2153
Query: 361 ccaaccaggtcataaatcacgtggatccaatgcttcttcccacagttttacctcggcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2152 ccaaccaggtcataaatcacgtggatccaatgcttcttcccacagttttacctcggcaaa 2093
Query: 421 tggccagcaaaactccaatggccgtaaatcacttttcgcaccctatttgccacaagctaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2092 tggccagcaaaactccaatggccgtaaatcacttttcgcaccctatttgccacaagctaa 2033
Query: 481 cattcctcaactaattgaagaaggcaaattggttgcaggtattctacgggtcaacaagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2032 cattcctcaactaattgaagaaggcaaattggttgcaggtattctacgggtcaacaagaa 1973
Query: 541 aaatagatcggatgcctgggtttcgaccaacggtgtgttggacgccgatattttcatttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1972 aaatagatcggatgcctgggtttcgaccaacggtgtgttggacgccgatattttcatttg 1913
Query: 601 tggttcgaaggatcgtaatagagctttggaaggtgatcttgttgccgttgagcttttgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1912 tggttcgaaggatcgtaatagagctttggaaggtgatcttgttgccgttgagcttttgat 1853
Query: 661 ggttgacgatgtctgggaatcgaaaaaggaaaaggaagagaagaagagaagaaaagatgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1852 ggttgacgatgtctgggaatcgaaaaaggaaaaggaagagaagaagagaagaaaagatgc 1793
Query: 721 aagcactcaacaagatattattccactagactctaaagatgattaccataatgatgcttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1792 aagcactcaacaagatattattccactagactctaaagatgattaccataatgatgcttc 1733
Query: 781 aacaagtattgttacaagcgcatcatgctctagtgaaaataaaggatcagatgctacatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1732 aacaagtattgttacaagcgcatcatgctctagtgaaaataaaggatcagatgctacatt 1673
Query: 841 gggatcttcatctggctccatcaaaagaagaggatcattgaagcagcgcccaactcaaaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1672 gggatcttcatctggctccatcaaaagaagaggatcattgaagcagcgcccaactcaaaa 1613
Query: 901 gaagaatgatgacgtag 917
|||||||||||||||||
Sbjct: 1612 gaagaatgatgacgtag 1596
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8220
Number of Sequences: 1807
Number of extensions: 8220
Number of successful extensions: 130
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)